BLASTN 2.11.0+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: Mesculenta_305_v6.fa 2,019 sequences; 582,281,492 total letters Query= Untitled_sequence Length=1251 Score E Sequences producing significant alignments: (Bits) Value Chromosome05 1986 0.0 Chromosome18 802 0.0 Chromosome10 91.6 2e-16 >Chromosome05 Length=28438989 Score = 1986 bits (1075), Expect = 0.0 Identities = 1075/1075 (100%), Gaps = 0/1075 (0%) Strand=Plus/Plus Query 1 ATGGGGACTCATCTCAACTTCAAGAACTTCCACAACAATCCTACGTCGGACGCCGGTGTG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24104558 ATGGGGACTCATCTCAACTTCAAGAACTTCCACAACAATCCTACGTCGGACGCCGGTGTG 24104617 Query 61 GGAGGGGGTAGCGGCAGCCGACCTTCGGGGAACTTCCCATTGGCCAGACAGCCATCGGTC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24104618 GGAGGGGGTAGCGGCAGCCGACCTTCGGGGAACTTCCCATTGGCCAGACAGCCATCGGTC 24104677 Query 121 TACTCGTTGACCTTCGATGAATTTCAGAGTACTATGGGGGGGATAGGAAAGGAATTTGGG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24104678 TACTCGTTGACCTTCGATGAATTTCAGAGTACTATGGGGGGGATAGGAAAGGAATTTGGG 24104737 Query 181 TCAATGAACATGGATGAGCTGCTCAAGAATATATGGAGTGCCGAGGAAACACAGAACGTG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24104738 TCAATGAACATGGATGAGCTGCTCAAGAATATATGGAGTGCCGAGGAAACACAGAACGTG 24104797 Query 241 GTAGCCTCCTCTACAGGTGCCCAAGAGGGTCTGCAGCGCCAAGGCTCTTTGACCCTCCCG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24104798 GTAGCCTCCTCTACAGGTGCCCAAGAGGGTCTGCAGCGCCAAGGCTCTTTGACCCTCCCG 24104857 Query 301 CGAACCCTCAGTCAAAAGACTGTCGATGAGGTGTGGAAAGACATGTCGAAGGAATATGGG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24104858 CGAACCCTCAGTCAAAAGACTGTCGATGAGGTGTGGAAAGACATGTCGAAGGAATATGGG 24104917 Query 361 AATGGAGGTGGTACTGGAGGAGCTAATTTGCCTCAGAGGCAGCAGACTTTAGGGGAGATC 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24104918 AATGGAGGTGGTACTGGAGGAGCTAATTTGCCTCAGAGGCAGCAGACTTTAGGGGAGATC 24104977 Query 421 ACTTTAGAGGAATTTTTGGTCAAAGCGGGGGTGGTGAGAGAAGACGCTCAATTAGCTGCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24104978 ACTTTAGAGGAATTTTTGGTCAAAGCGGGGGTGGTGAGAGAAGACGCTCAATTAGCTGCA 24105037 Query 481 AAGCTTAATGCTAATGGTGGTTTTTTTGGTGATTTATCGAGGACAGGGAATAGTTCTACT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105038 AAGCTTAATGCTAATGGTGGTTTTTTTGGTGATTTATCGAGGACAGGGAATAGTTCTACT 24105097 Query 541 TTAGGAGTTGGGTTACAGCAGAATAGGGGTCTGGGATTGGACAATAATAATACTAATCAG 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105098 TTAGGAGTTGGGTTACAGCAGAATAGGGGTCTGGGATTGGACAATAATAATACTAATCAG 24105157 Query 601 ATTTCTATGCGTTCCACGAATTTGCCTTTGAATGTTAATGGGGTCAGGTCAAACCAGGCA 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105158 ATTTCTATGCGTTCCACGAATTTGCCTTTGAATGTTAATGGGGTCAGGTCAAACCAGGCA 24105217 Query 661 CAGGTACATCAGCAACATCAGCAACAGCAGCAACAACAACAACAACAGCAACAGCTATTT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105218 CAGGTACATCAGCAACATCAGCAACAGCAGCAACAACAACAACAACAGCAACAGCTATTT 24105277 Query 721 CCTAAGCAGCCTAATTTGGGATATGTTACGCAGATGCCTTTGCAAACTAGTCCAGGAATT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105278 CCTAAGCAGCCTAATTTGGGATATGTTACGCAGATGCCTTTGCAAACTAGTCCAGGAATT 24105337 Query 781 AGGGGTGGAATCATGGGGATTGGGGATCAAGGGATCAGTGGTTTGATGCAGGCTGGTGCT 840 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105338 AGGGGTGGAATCATGGGGATTGGGGATCAAGGGATCAGTGGTTTGATGCAGGCTGGTGCT 24105397 Query 841 TTGGGAATGGTTGGATTAGGTGTCGCAACGGAATCACCTGCAAACAAGCTGTCGTCAAAT 900 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105398 TTGGGAATGGTTGGATTAGGTGTCGCAACGGAATCACCTGCAAACAAGCTGTCGTCAAAT 24105457 Query 901 GGGATTACAAAGAGTAATGGGGATACGTCTTCAGTGTCCCCAGTTCCTTATGTCTTCAAT 960 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105458 GGGATTACAAAGAGTAATGGGGATACGTCTTCAGTGTCCCCAGTTCCTTATGTCTTCAAT 24105517 Query 961 GGAGGTTTAAGGGGAAGGAGAGCCAATGGTGCTGTGGAGAAGGTGGTTGAGAGGAGACAG 1020 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105518 GGAGGTTTAAGGGGAAGGAGAGCCAATGGTGCTGTGGAGAAGGTGGTTGAGAGGAGACAG 24105577 Query 1021 AGAAGAATGATTAAGAACAGAGAGTCAGCTGCAAGGTCACGGGCTCGCAAGCAGG 1075 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24105578 AGAAGAATGATTAAGAACAGAGAGTCAGCTGCAAGGTCACGGGCTCGCAAGCAGG 24105632 Score = 143 bits (77), Expect = 5e-32 Identities = 77/77 (100%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 1175 AGGTATTGGAGATGATGAACGAGCAGCAGGGAGTTAAAAGGCGGTGCTTGAGGAGGACTC 1234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24109373 AGGTATTGGAGATGATGAACGAGCAGCAGGGAGTTAAAAGGCGGTGCTTGAGGAGGACTC 24109432 Query 1235 AGACTGGTCCATGGTAA 1251 ||||||||||||||||| Sbjct 24109433 AGACTGGTCCATGGTAA 24109449 Score = 139 bits (75), Expect = 7e-31 Identities = 75/75 (100%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1073 AGGCTTATACTATGGAGTTGGAAGCAGAAGTTGCAAAGATAAAAGAGGAGAACCGAGAAT 1132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 24106546 AGGCTTATACTATGGAGTTGGAAGCAGAAGTTGCAAAGATAAAAGAGGAGAACCGAGAAT 24106605 Query 1133 TGCAAAAGAAACAGG 1147 ||||||||||||||| Sbjct 24106606 TGCAAAAGAAACAGG 24106620 >Chromosome18 Length=25234269 Score = 802 bits (434), Expect = 0.0 Identities = 596/677 (88%), Gaps = 0/677 (0%) Strand=Plus/Plus Query 1 ATGGGGACTCATCTCAACTTCAAGAACTTCCACAACAATCCTACGTCGGACGCCGGTGTG 60 ||||||||| || ||||||||||||||||| |||| | ||| || | |||||||||| Sbjct 3265608 ATGGGGACTAATATCAACTTCAAGAACTTCACCAACGACCCTTCGGCTGACGCCGGTGGA 3265667 Query 61 GGAGGGGGTAGCGGCAGCCGACCTTCGGGGAACTTCCCATTGGCCAGACAGCCATCGGTC 120 |||| || |||| || ||| || |||||||||| || |||||||||||| |||| || Sbjct 3265668 GGAGCAGGCAGCGCCACCCGCCCGCCGGGGAACTTTCCCTTGGCCAGACAGACATCTATC 3265727 Query 121 TACTCGTTGACCTTCGATGAATTTCAGAGTACTATGGGGGGGATAGGAAAGGAATTTGGG 180 |||||||||||||||||||||||||||| || |||||||| ||||| ||||| |||||| Sbjct 3265728 TACTCGTTGACCTTCGATGAATTTCAGAACACCATGGGGGGAATAGGTAAGGACTTTGGG 3265787 Query 181 TCAATGAACATGGATGAGCTGCTCAAGAATATATGGAGTGCCGAGGAAACACAGAACGTG 240 |||||||||||||||||||| |||||||| ||||||||||| ||||||||||||| | || Sbjct 3265788 TCAATGAACATGGATGAGCTTCTCAAGAACATATGGAGTGCGGAGGAAACACAGAGCATG 3265847 Query 241 GTAGCCTCCTCTACAGGTGCCCAAGAGGGTCTGCAGCGCCAAGGCTCTTTGACCCTCCCG 300 |||||||| ||| | |||||||||| ||||||||||||||||||||||||||| ||| Sbjct 3265848 GTAGCCTCTTCTGGTGCTGCCCAAGAGAATCTGCAGCGCCAAGGCTCTTTGACCCTGCCG 3265907 Query 301 CGAACCCTCAGTCAAAAGACTGTCGATGAGGTGTGGAAAGACATGTCGAAGGAATATGGG 360 ||||||||||| ||||||||||| |||||||||||||||||||| |||||||| |||||| Sbjct 3265908 CGAACCCTCAGCCAAAAGACTGTGGATGAGGTGTGGAAAGACATATCGAAGGATTATGGG 3265967 Query 361 AATGGAGGTGGTACTGGAGGAGCTAATTTGCCTCAGAGGCAGCAGACTTTAGGGGAGATC 420 |||||||||||||||| || |||||||||||| |||||||||||||||||||||||||| Sbjct 3265968 AATGGAGGTGGTACTGCAGCAGCTAATTTGCCCCAGAGGCAGCAGACTTTAGGGGAGATG 3266027 Query 421 ACTTTAGAGGAATTTTTGGTCAAAGCGGGGGTGGTGAGAGAAGACGCTCAATTAGCTGCA 480 ||||||||||| |||||||| | ||| ||||||||||||||||| | ||||||||||||| Sbjct 3266028 ACTTTAGAGGAGTTTTTGGTTAGAGCTGGGGTGGTGAGAGAAGATGTTCAATTAGCTGCA 3266087 Query 481 AAGCTTAATGCTAATGGTGGTTTTTTTGGTGATTTATCGAGGACAGGGAATAGTTCTACT 540 ||| |||||||||||||||||||| ||| |||||||||| ||| |||| | |||| || Sbjct 3266088 AAGGTTAATGCTAATGGTGGTTTTCTTGCCGATTTATCGAAGACGGGGACTTATTCTGCT 3266147 Query 541 TTAGGAGTTGGGTTACAGCAGAATAGGGGTCTGGGATTGGACAATAATAATACTAATCAG 600 |||||| | ||||| |||||||||||| | |||||| || |||||||||||||||||||| Sbjct 3266148 TTAGGAATGGGGTTTCAGCAGAATAGGAGCCTGGGACTGAACAATAATAATACTAATCAG 3266207 Query 601 ATTTCTATGCGTTCCACGAATTTGCCTTTGAATGTTAATGGGGTCAGGTCAAACCAGGCA 660 |||||||||| |||| ||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 3266208 ATTTCTATGCATTCCTCGAATTTGCCTTTGAATGTTAATGGGGTCAGATCAAATCAGGCC 3266267 Query 661 CAGGTACATCAGCAACA 677 ||||| || |||||||| Sbjct 3266268 CAGGTGCAGCAGCAACA 3266284 Score = 440 bits (238), Expect = 2e-121 Identities = 338/385 (88%), Gaps = 12/385 (3%) Strand=Plus/Plus Query 697 CAACAACAACAGCAACAGCTATTTCCTAAGCAGCCTAATTTGGGATATGTTACGCAGATG 756 || || ||||||||| | |||||||||||||||||||||||||||| | || |||||| Sbjct 3266274 CAGCAGCAACAGCAA-A--TATTTCCTAAGCAGCCTAATTTGGGATACGCAACACAGATG 3266330 Query 757 CCTTTGCAAACTAGTCCAGGAATTAGGGGTGGAATCATGGGGATTGGGGATCAAGGGATC 816 |||||||||| |||||| ||||| ||||||||||||||||||||||||||||| || ||| Sbjct 3266331 CCTTTGCAAAGTAGTCCTGGAATGAGGGGTGGAATCATGGGGATTGGGGATCAGGGAATC 3266390 Query 817 A---GTGGTTTGATGCAGGCTGGTGCTTTGGGAATGGTTGGATTAGGTG-T-C-GCAACG 870 | ||||||||||||||| ||| ||||||||||||||||| |||| | | | | ||| Sbjct 3266391 AGCGGTGGTTTGATGCAGGGTGGAGCTTTGGGAATGGTTGGGCTAGGAGGTGCTGTAACA 3266450 Query 871 GAATCACCTGCAAACAAGCTGTCGTCAAATGGGATTACAAAGAGTAATGGGGATACGTCT 930 | ||||||||||||| ||||||| ||| |||||||||| || || ||||||||| ||| Sbjct 3266451 GGATCACCTGCAAACCAGCTGTCTTCAGATGGGATTACTAAAAG---TGGGGATACATCT 3266507 Query 931 TCAGTGTCCCCAGTTCCTTATGTCTTCAATGGAGGTTTAAGGGGAAGGAGAGCCAATGGT 990 |||||||| ||||||||||||||||| ||||||||| |||||||||||||||| | |||| Sbjct 3266508 TCAGTGTCGCCAGTTCCTTATGTCTTTAATGGAGGTCTAAGGGGAAGGAGAGCTAGTGGT 3266567 Query 991 GCTGTGGAGAAGGTGGTTGAGAGGAGACAGAGAAGAATGATTAAGAACAGAGAGTCAGCT 1050 |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| ||| Sbjct 3266568 GCTGTGGAGAAGGTGGTTGAGAGGAGGCAGAGAAGGATGATAAAGAACAGAGAGTCTGCT 3266627 Query 1051 GCAAGGTCACGGGCTCGCAAGCAGG 1075 ||||||||||| ||||||||||||| Sbjct 3266628 GCAAGGTCACGAGCTCGCAAGCAGG 3266652 Score = 122 bits (66), Expect = 7e-26 Identities = 72/75 (96%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1073 AGGCTTATACTATGGAGTTGGAAGCAGAAGTTGCAAAGATAAAAGAGGAGAACCGAGAAT 1132 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct 3267556 AGGCTTATACTATGGAGTTGGAAGCAGAAGTTGCAAAGTTAAAAGAGGAGAACCAAGAAT 3267615 Query 1133 TGCAAAAGAAACAGG 1147 ||| ||||||||||| Sbjct 3267616 TGCTAAAGAAACAGG 3267630 Score = 87.9 bits (47), Expect = 2e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 1175 AGGTATTGGAGATGATGAACGAGCAGCAGGGAGTTAAAAGGCGGTGCTTGAGGAGGACTC 1234 |||| ||||||||||||| ||||||||||||| || | || |||||||||||||||| Sbjct 3269245 AGGTGATGGAGATGATGAATCAGCAGCAGGGAGTAAAGAAACGTTGCTTGAGGAGGACTC 3269304 Query 1235 AGACTGGTCCATGGTAA 1251 |||| |||||||||||| Sbjct 3269305 AGACCGGTCCATGGTAA 3269321 >Chromosome10 Length=26335333 Score = 91.6 bits (49), Expect = 2e-16 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 971 GGGGAAGGAGAGCCAATGGTGCTGTGGAGAAGGTGGTTGAGAGGAGACAGAGAAGAATGA 1030 ||||||| | |||| || || |||||||||| ||||||| ||||| | ||||||| Sbjct 15542234 GGGGAAGAAAAGCCGGTGCAGCGTTGGAGAAGGTAATTGAGAGAAGACACCGGAGAATGA 15542293 Query 1031 TTAAGAACAGAGAGTCAGCTGCAAGGTCACGGGCTCGCAAGCA 1073 | || || || |||||||||||||||||||||||||||||||| Sbjct 15542294 TAAAAAATAGGGAGTCAGCTGCAAGGTCACGGGCTCGCAAGCA 15542336 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 711476433902 Database: Mesculenta_305_v6.fa Posted date: Oct 21, 2019 4:03 PM Number of letters in database: 582,281,492 Number of sequences in database: 2,019 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5