BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Mesculenta_305_v6.fa
           2,019 sequences; 582,281,492 total letters



Query= Untitled_sequence

Length=66
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Chromosome12                                                          122     2e-27


>Chromosome12 
Length=31602189

 Score = 122 bits (66),  Expect = 2e-27
 Identities = 66/66 (100%), Gaps = 0/66 (0%)
 Strand=Plus/Plus

Query  1        TTTTTATGATTTTATCTAATAATTTTAGGAAGCTAAGGATCCGCTTGTGAAGGCTGTTCT  60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  8345650  TTTTTATGATTTTATCTAATAATTTTAGGAAGCTAAGGATCCGCTTGTGAAGGCTGTTCT  8345709

Query  61       AGATGG  66
                ||||||
Sbjct  8345710  AGATGG  8345715



Lambda      K        H
    1.33    0.621     1.12 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 23871471697


  Database: Mesculenta_305_v6.fa
    Posted date:  Oct 21, 2019  4:03 PM
  Number of letters in database: 582,281,492
  Number of sequences in database:  2,019



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5