Index of /ftp/marnin_datasets/nextgenImputation2019/ImputationEastAfrica_StageII_90919/
../
BeagleLogs/ 22-Apr-2020 11:56 -
chr10_ImputationReferencePanel_StageIVsamples_R..> 21-Apr-2020 17:47 6631
chr10_ImputationReferencePanel_StageVI_91119.vc..> 21-Apr-2020 17:47 17230156
chr10_ImputationReferencePanel_StageV_91019.sit..> 21-Apr-2020 17:47 82669
chr10_ImputationReferencePanel_StageV_91019.vcf.gz 21-Apr-2020 17:47 18957166
chr10_ImputationReferencePanel_StageVsamples_Re..> 21-Apr-2020 17:47 6167
chr10_ImputedGBS_90919.sitesPassing 21-Apr-2020 17:47 2058
chr10_tzTP_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 24914
chr10_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 40573
chr10_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 147467
chr10_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 601
chr10_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 4911679
chr10_tzTPplusUgC1samples_PreImputedAtGBSsites_..> 21-Apr-2020 17:47 1197766
chr10_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 79542
chr10_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 274430
chr10_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 585
chr10_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 32562
chr10_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 1217055
chr10_tzTPsamples_AllSitesREFimputedAndPhased_R..> 21-Apr-2020 17:47 5750
chr10_tzTPsamples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 405598
chr10_tzTPsamples_REFimputedGBSsites_90919.vcf...> 21-Apr-2020 17:47 1029
chr10_tzTPsamples_REFimputedGBSsites_91019.vcf...> 21-Apr-2020 17:47 5564
chr10_ugC1_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 2104
chr10_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 79542
chr10_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 275994
chr10_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 585
chr10_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 5491023
chr10_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 79003
chr10_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 279008
chr10_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 617
chr10_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 27785
chr10_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 2455237
chr10_ugC1samples_FromJune2016vcf_REFimputedGLm..> 21-Apr-2020 17:47 6120
chr10_ugC1samples_FromJune2016vcf_REFimputedGLm..> 21-Apr-2020 17:47 3325688
chr10_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 79003
chr10_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 279103
chr10_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 623
chr10_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 24447
chr10_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 1957607
chr10_ugC1samples_FromJune2016vcf_Ready2GTimput..> 21-Apr-2020 17:47 8753800
chr10_ugC1samples_FromJune2016vcf_ReadyToMergeW..> 21-Apr-2020 17:47 5566
chr10_ugC1samples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 774164
chr10_ugC1samples_REFimputedGBSsites_90919.vcf...> 21-Apr-2020 17:47 1111
chr10_ugC1samples_REFimputedGBSsites_91019.vcf...> 21-Apr-2020 17:47 1141
chr10_ugC1samples_sitesInRefPanelVtoImpute_9101..> 21-Apr-2020 17:47 31275
chr11_ImputationReferencePanel_StageIVsamples_R..> 21-Apr-2020 17:47 8261
chr11_ImputationReferencePanel_StageVI_91119.vc..> 21-Apr-2020 17:47 21719814
chr11_ImputationReferencePanel_StageV_91019.sit..> 21-Apr-2020 17:47 94807
chr11_ImputationReferencePanel_StageV_91019.vcf.gz 21-Apr-2020 17:47 24757168
chr11_ImputationReferencePanel_StageVsamples_Re..> 21-Apr-2020 17:47 7554
chr11_ImputedGBS_90919.sitesPassing 21-Apr-2020 17:47 3432
chr11_tzTP_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 27606
chr11_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 90962
chr11_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 323137
chr11_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 601
chr11_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 10291061
chr11_tzTPplusUgC1samples_PreImputedAtGBSsites_..> 21-Apr-2020 17:47 2281537
chr11_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 90800
chr11_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 312980
chr11_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 585
chr11_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 37641
chr11_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 1533457
chr11_tzTPsamples_AllSitesREFimputedAndPhased_R..> 21-Apr-2020 17:47 7080
chr11_tzTPsamples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 774699
chr11_tzTPsamples_REFimputedGBSsites_90919.vcf...> 21-Apr-2020 17:47 1564
chr11_tzTPsamples_REFimputedGBSsites_91019.vcf...> 21-Apr-2020 17:47 6780
chr11_ugC1_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 3443
chr11_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 90800
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chr11_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 6303103
chr11_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 90418
chr11_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 317843
chr11_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 617
chr11_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 30737
chr11_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 2700689
chr11_ugC1samples_FromJune2016vcf_REFimputedGLm..> 21-Apr-2020 17:47 6131
chr11_ugC1samples_FromJune2016vcf_REFimputedGLm..> 21-Apr-2020 17:47 4069924
chr11_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 90418
chr11_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 317996
chr11_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 623
chr11_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 27815
chr11_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 2326441
chr11_ugC1samples_FromJune2016vcf_Ready2GTimput..> 21-Apr-2020 17:47 9660486
chr11_ugC1samples_FromJune2016vcf_ReadyToMergeW..> 21-Apr-2020 17:47 6752
chr11_ugC1samples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 1448731
chr11_ugC1samples_REFimputedGBSsites_90919.vcf...> 21-Apr-2020 17:47 1644
chr11_ugC1samples_REFimputedGBSsites_91019.vcf...> 21-Apr-2020 17:47 1651
chr11_ugC1samples_sitesInRefPanelVtoImpute_9101..> 21-Apr-2020 17:47 36215
chr12_ImputationReferencePanel_StageIVsamples_R..> 21-Apr-2020 17:47 7706
chr12_ImputationReferencePanel_StageVI_91119.vc..> 21-Apr-2020 17:47 19848971
chr12_ImputationReferencePanel_StageV_91019.sit..> 21-Apr-2020 17:47 83843
chr12_ImputationReferencePanel_StageV_91019.vcf.gz 21-Apr-2020 17:47 20166504
chr12_ImputationReferencePanel_StageVsamples_Re..> 21-Apr-2020 17:47 7410
chr12_ImputedGBS_90919.sitesPassing 21-Apr-2020 17:47 2111
chr12_tzTP_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 24122
chr12_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 79895
chr12_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 284663
chr12_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 601
chr12_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 9445726
chr12_tzTPplusUgC1samples_PreImputedAtGBSsites_..> 21-Apr-2020 17:47 1267477
chr12_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 79895
chr12_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 275755
chr12_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 585
chr12_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 33169
chr12_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 1394663
chr12_tzTPsamples_AllSitesREFimputedAndPhased_R..> 21-Apr-2020 17:47 6628
chr12_tzTPsamples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 445936
chr12_tzTPsamples_REFimputedGBSsites_90919.vcf...> 21-Apr-2020 17:47 1052
chr12_tzTPsamples_REFimputedGBSsites_91019.vcf...> 21-Apr-2020 17:47 6243
chr12_ugC1_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 2159
chr12_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 79895
chr12_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 279192
chr12_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 585
chr12_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 5848240
chr12_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 79482
chr12_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 279149
chr12_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 617
chr12_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 29777
chr12_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 2373085
chr12_ugC1samples_FromJune2016vcf_REFimputedGLm..> 21-Apr-2020 17:47 6132
chr12_ugC1samples_FromJune2016vcf_REFimputedGLm..> 21-Apr-2020 17:47 3550881
chr12_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 79482
chr12_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 279172
chr12_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 623
chr12_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 27069
chr12_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 2098287
chr12_ugC1samples_FromJune2016vcf_Ready2GTimput..> 21-Apr-2020 17:47 8511427
chr12_ugC1samples_FromJune2016vcf_ReadyToMergeW..> 21-Apr-2020 17:47 6631
chr12_ugC1samples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 792279
chr12_ugC1samples_REFimputedGBSsites_90919.vcf...> 21-Apr-2020 17:47 1119
chr12_ugC1samples_REFimputedGBSsites_91019.vcf...> 21-Apr-2020 17:47 1136
chr12_ugC1samples_sitesInRefPanelVtoImpute_9101..> 21-Apr-2020 17:47 32050
chr13_ImputationReferencePanel_StageIVsamples_R..> 21-Apr-2020 17:47 7560
chr13_ImputationReferencePanel_StageVI_91119.vc..> 21-Apr-2020 17:47 17438390
chr13_ImputationReferencePanel_StageV_91019.sit..> 21-Apr-2020 17:47 80879
chr13_ImputationReferencePanel_StageV_91019.vcf.gz 21-Apr-2020 17:47 18878984
chr13_ImputationReferencePanel_StageVsamples_Re..> 21-Apr-2020 17:47 7196
chr13_ImputedGBS_90919.sitesPassing 21-Apr-2020 17:47 3019
chr13_tzTP_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 23995
chr13_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 77047
chr13_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 272353
chr13_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 601
chr13_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 8133224
chr13_tzTPplusUgC1samples_PreImputedAtGBSsites_..> 21-Apr-2020 17:47 1411617
chr13_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 76995
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chr13_tzTPsamples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 1229800
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chr13_tzTPsamples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 455963
chr13_tzTPsamples_REFimputedGBSsites_90919.vcf...> 21-Apr-2020 17:47 1441
chr13_tzTPsamples_REFimputedGBSsites_91019.vcf...> 21-Apr-2020 17:47 6342
chr13_ugC1_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 3067
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chr13_ugC1samples_AllSitesREFimputedAndPhased_9..> 21-Apr-2020 17:47 5046065
chr13_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 76380
chr13_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 267199
chr13_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 617
chr13_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 27327
chr13_ugC1samples_FromJune2016vcf_AllSitesREFim..> 21-Apr-2020 17:47 2311874
chr13_ugC1samples_FromJune2016vcf_REFimputedGLm..> 21-Apr-2020 17:47 4164
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chr13_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 76380
chr13_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 267239
chr13_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 623
chr13_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 23963
chr13_ugC1samples_FromJune2016vcf_REFimputedGTm..> 21-Apr-2020 17:47 1948628
chr13_ugC1samples_FromJune2016vcf_Ready2GTimput..> 21-Apr-2020 17:47 8446952
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chr13_ugC1samples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 916488
chr13_ugC1samples_REFimputedGBSsites_90919.vcf...> 21-Apr-2020 17:47 1541
chr13_ugC1samples_REFimputedGBSsites_91019.vcf...> 21-Apr-2020 17:47 1552
chr13_ugC1samples_sitesInRefPanelVtoImpute_9101..> 21-Apr-2020 17:47 30630
chr14_ImputationReferencePanel_StageIVsamples_R..> 21-Apr-2020 17:47 8143
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chr14_ImputationReferencePanel_StageV_91019.vcf.gz 21-Apr-2020 17:47 27955922
chr14_ImputationReferencePanel_StageVsamples_Re..> 21-Apr-2020 17:47 7936
chr14_ImputedGBS_90919.sitesPassing 21-Apr-2020 17:47 3638
chr14_tzTP_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 37002
chr14_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 114264
chr14_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 407378
chr14_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 601
chr14_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 13077516
chr14_tzTPplusUgC1samples_PreImputedAtGBSsites_..> 21-Apr-2020 17:47 1745187
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chr15_tzTP_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 32754
chr15_tzTPplusUgC1samples_AllSitesREFimputedAnd..> 21-Apr-2020 17:47 107684
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chr15_tzTPplusUgC1samples_PreImputedAtGBSsites_..> 21-Apr-2020 17:47 1580119
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chr8_ugC1samples_REFimputedGBSsites_91019.vcf.g..> 21-Apr-2020 17:47 1203
chr8_ugC1samples_sitesInRefPanelVtoImpute_91019..> 21-Apr-2020 17:47 37018
chr9_ImputationReferencePanel_StageIVsamples_Re..> 21-Apr-2020 17:47 8814
chr9_ImputationReferencePanel_StageVI_91119.vcf.gz 21-Apr-2020 17:47 21645545
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chr9_ImputationReferencePanel_StageV_91019.vcf.gz 21-Apr-2020 17:47 23857211
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chr9_ImputedGBS_90919.sitesPassing 21-Apr-2020 17:47 4053
chr9_tzTP_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 26513
chr9_tzTPplusUgC1samples_AllSitesREFimputedAndP..> 21-Apr-2020 17:47 92076
chr9_tzTPplusUgC1samples_AllSitesREFimputedAndP..> 21-Apr-2020 17:47 335369
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chr9_tzTPplusUgC1samples_PreImputedAtGBSsites_9..> 21-Apr-2020 17:47 2674273
chr9_tzTPsamples_AllSitesREFimputedAndPhased_91..> 21-Apr-2020 17:47 92049
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chr9_tzTPsamples_AllSitesREFimputedAndPhased_Re..> 21-Apr-2020 17:47 7646
chr9_tzTPsamples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 899313
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chr9_tzTPsamples_REFimputedGBSsites_91019.vcf.g..> 21-Apr-2020 17:47 7469
chr9_ugC1_ImputedGBS_91019.sitesPassing 21-Apr-2020 17:47 4064
chr9_ugC1samples_AllSitesREFimputedAndPhased_91..> 21-Apr-2020 17:47 92049
chr9_ugC1samples_AllSitesREFimputedAndPhased_91..> 21-Apr-2020 17:47 328854
chr9_ugC1samples_AllSitesREFimputedAndPhased_91..> 21-Apr-2020 17:47 583
chr9_ugC1samples_AllSitesREFimputedAndPhased_91..> 21-Apr-2020 17:47 6417773
chr9_ugC1samples_FromJune2016vcf_AllSitesREFimp..> 21-Apr-2020 17:47 91889
chr9_ugC1samples_FromJune2016vcf_AllSitesREFimp..> 21-Apr-2020 17:47 330037
chr9_ugC1samples_FromJune2016vcf_AllSitesREFimp..> 21-Apr-2020 17:47 615
chr9_ugC1samples_FromJune2016vcf_AllSitesREFimp..> 21-Apr-2020 17:47 30873
chr9_ugC1samples_FromJune2016vcf_AllSitesREFimp..> 21-Apr-2020 17:47 2950362
chr9_ugC1samples_FromJune2016vcf_REFimputedGTmo..> 21-Apr-2020 17:47 91889
chr9_ugC1samples_FromJune2016vcf_REFimputedGTmo..> 21-Apr-2020 17:47 330064
chr9_ugC1samples_FromJune2016vcf_REFimputedGTmo..> 21-Apr-2020 17:47 621
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chr9_ugC1samples_FromJune2016vcf_REFimputedGTmo..> 21-Apr-2020 17:47 2488093
chr9_ugC1samples_FromJune2016vcf_Ready2GTimpute..> 21-Apr-2020 17:47 9777368
chr9_ugC1samples_FromJune2016vcf_ReadyToMergeWi..> 21-Apr-2020 17:47 7437
chr9_ugC1samples_REFimputedGBSsites_90919.vcf.gz 21-Apr-2020 17:47 1715789
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chr9_ugC1samples_REFimputedGBSsites_91019.vcf.g..> 21-Apr-2020 17:47 1952
chr9_ugC1samples_sitesInRefPanelVtoImpute_91019..> 21-Apr-2020 17:47 35188
gbsOnlySamplesToImpute_tzTP_90919.txt 21-Apr-2020 17:47 30382
gbsOnlySamplesToImpute_ugC1_90919.txt 21-Apr-2020 17:47 44045
iitaSamples2remove_fromUgC1RefPanel_91019.txt 21-Apr-2020 17:47 248459
out.log 21-Apr-2020 17:47 823