Index of /ftp/marnin_datasets/implementGMSinCassava/output/
../
Cassava_HMII_V3_Marning_imputation_6-18-21.samples 02-Aug-2021 13:18 176K
IITA_CleanedTrialData_2021May10.rds 02-Aug-2021 13:15 12M
IITA_ExptDesignsDetected_2021May10.rds 02-Aug-2021 13:13 12M
IITA_blupsForModelTraining_twostage_asreml_2021..> 02-Aug-2021 13:18 9M
IITA_trials_NOT_identifiable.csv 02-Aug-2021 13:16 8442
README.md 02-Aug-2021 13:15 42
alphaAssignOutput_iita_pedigree.txt.dams 02-Aug-2021 13:15 688K
alphaAssignOutput_iita_pedigree.txt.dams.full 02-Aug-2021 13:18 1M
alphaAssignOutput_iita_pedigree.txt.pedigree 02-Aug-2021 13:15 666K
alphaAssignOutput_iita_pedigree.txt.pedigree.top 02-Aug-2021 13:18 864K
alphaAssignOutput_iita_pedigree.txt.sires 02-Aug-2021 13:18 687K
alphaAssignOutput_iita_pedigree.txt.sires.full 02-Aug-2021 13:18 1M
crossValPredsA.rds 02-Aug-2021 13:11 3M
crossValPredsAD.rds 02-Aug-2021 13:11 4M
cvAD_1rep_markerEffects.rds 02-Aug-2021 13:18 109M
cvAD_1rep_meanPredAccuracy.rds 02-Aug-2021 13:12 376K
cvAD_1rep_parentfolds.rds 02-Aug-2021 13:12 132K
cvAD_1rep_predAccuracy.rds 02-Aug-2021 13:12 2M
cvAD_1rep_predMeans.rds 02-Aug-2021 13:11 270K
cvAD_1rep_predVars.rds 02-Aug-2021 13:15 906K
cvAD_1rep_varPredAccuracy.rds 02-Aug-2021 13:12 2M
cvAD_5rep5fold_markerEffects.rds 02-Aug-2021 13:16 548M
cvAD_5rep5fold_meanPredAccuracy.rds 02-Aug-2021 13:13 965K
cvAD_5rep5fold_parentfolds.rds 02-Aug-2021 13:15 650K
cvAD_5rep5fold_predAccuracy.rds 02-Aug-2021 13:13 11M
cvAD_5rep5fold_predMeans.rds 02-Aug-2021 13:15 907K
cvAD_5rep5fold_predVars.rds 02-Aug-2021 13:11 4M
cvAD_5rep5fold_varPredAccuracy.rds 02-Aug-2021 13:15 10M
cvDirDom_1Mb_50kb_pt5_predAccuracy.rds 04-Aug-2021 17:01 12M
cvDirDom_1Mb_50kb_pt6_predAccuracy.rds 04-Aug-2021 17:02 12M
cvDirDom_1Mb_50kb_pt8_predAccuracy.rds 04-Aug-2021 17:02 12M
cvDirDom_1Mb_50kb_pt9_predAccuracy.rds 04-Aug-2021 17:01 12M
cvDirDom_5rep5fold_markerEffects.rds 02-Aug-2021 13:19 991M
cvDirDom_5rep5fold_meanPredAccuracy.rds 02-Aug-2021 13:15 2M
cvDirDom_5rep5fold_parentfolds.rds 02-Aug-2021 13:15 650K
cvDirDom_5rep5fold_predAccuracy.rds 02-Aug-2021 13:12 12M
cvDirDom_5rep5fold_predMeans.rds 02-Aug-2021 13:15 1M
cvDirDom_5rep5fold_predVars.rds 02-Aug-2021 13:11 8M
cvDirDom_5rep5fold_varPredAccuracy.rds 02-Aug-2021 13:15 10M
cvMeanPredAccuracyA.rds 02-Aug-2021 13:12 969K
cvMeanPredAccuracyAD.rds 02-Aug-2021 13:13 2M
cvPredMeansA.rds 02-Aug-2021 13:15 912K
cvPredMeansAD.rds 02-Aug-2021 13:15 1M
cvVarPredAccuracyA.rds 02-Aug-2021 13:18 5M
cvVarPredAccuracyAD.rds 02-Aug-2021 13:18 10M
estimateSelectionError.rds 02-Aug-2021 13:16 12M
genomicMatePredictions_top121parents_ModelAD.csv 02-Aug-2021 13:13 28M
genomicMatePredictions_top121parents_ModelAD.rds 02-Aug-2021 13:11 14M
genomicMatePredictions_top121parents_ModelDirDo..> 02-Aug-2021 13:18 28M
genomicMatePredictions_top121parents_ModelDirDo..> 02-Aug-2021 13:15 18M
genomicPredictions_ModelAD.csv 02-Aug-2021 13:18 4M
genomicPredictions_ModelAD.rds 02-Aug-2021 13:15 12M
genomicPredictions_ModelDirDom.csv 02-Aug-2021 13:15 4M
genomicPredictions_ModelDirDom.rds 02-Aug-2021 13:18 22M
kinship_A_IITA_2021May13.rds 02-Aug-2021 13:13 469M
kinship_D_IITA_2021May13.rds 02-Aug-2021 13:15 469M
kinship_domGenotypic_IITA_2021July5.rds 02-Aug-2021 13:18 469M
kinships_LDpruningSeries_2021Aug02.qs 04-Aug-2021 17:12 3G
markEffsTest.rds 02-Aug-2021 13:12 3M
markerEffects.rds 02-Aug-2021 13:12 285M
markerEffectsA.rds 02-Aug-2021 13:13 389M
markerEffectsAD.rds 02-Aug-2021 13:15 638M
maxNOHAV_byStudy.csv 02-Aug-2021 13:13 111K
obsCrossMeansAndVars.rds 02-Aug-2021 13:16 117M
parentfolds.rds 02-Aug-2021 13:13 651K
ped2check_genome.rds 02-Aug-2021 13:15 269K
ped2genos.txt 02-Aug-2021 13:16 377K
pednames2keep.txt 02-Aug-2021 13:12 143K
pednames_Prune100_25_pt25.log 02-Aug-2021 13:18 2178
pednames_Prune100_25_pt25.nosex 02-Aug-2021 13:16 621K
pednames_Prune100_25_pt25.prune.in 02-Aug-2021 13:18 31K
pednames_Prune100_25_pt25.prune.out 02-Aug-2021 13:11 773K
potential_dams.txt 02-Aug-2021 13:16 259K
potential_sires.txt 02-Aug-2021 13:11 258K
predVarTest.rds 02-Aug-2021 13:18 871K
samples2keep_IITA_2021May13.txt 02-Aug-2021 13:16 199K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt5.log 04-Aug-2021 17:02 2162
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt5.nosex 04-Aug-2021 17:01 621K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt5.pru..> 04-Aug-2021 17:01 87K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt5.pru..> 04-Aug-2021 17:02 717K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt6.log 04-Aug-2021 17:02 2162
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt6.nosex 04-Aug-2021 17:01 621K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt6.pru..> 04-Aug-2021 17:01 112K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt6.pru..> 04-Aug-2021 17:01 692K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt7.log 04-Aug-2021 17:02 2162
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt7.nosex 04-Aug-2021 17:01 621K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt7.pru..> 04-Aug-2021 17:01 142K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt7.pru..> 04-Aug-2021 17:01 662K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt8.log 04-Aug-2021 17:01 2166
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt8.nosex 04-Aug-2021 17:01 621K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt8.pru..> 04-Aug-2021 17:01 180K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt8.pru..> 04-Aug-2021 17:02 624K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt9.log 04-Aug-2021 17:01 2174
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt9.nosex 04-Aug-2021 17:02 621K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt9.pru..> 04-Aug-2021 17:01 242K
samples2keep_IITA_MAFpt01_prune1Mb_50kb_pt9.pru..> 04-Aug-2021 17:02 562K
samples2keep_IITA_MAFpt01_prune50_25_pt98.log 02-Aug-2021 13:15 2280
samples2keep_IITA_MAFpt01_prune50_25_pt98.nosex 02-Aug-2021 13:12 621K
samples2keep_IITA_MAFpt01_prune50_25_pt98.prune.in 02-Aug-2021 13:15 409K
samples2keep_IITA_MAFpt01_prune50_25_pt98.prune..> 02-Aug-2021 13:13 386K
samples2keep_notInPHGdb.txt 02-Aug-2021 13:18 30K
stdcvDirDom_1Mb_50kb_pt5_predAccuracy.rds 04-Aug-2021 17:01 75M
stdcvDirDom_1Mb_50kb_pt6_predAccuracy.rds 04-Aug-2021 17:02 74M
stdcvDirDom_1Mb_50kb_pt8_predAccuracy.rds 04-Aug-2021 17:02 74M
stdcvDirDom_1Mb_50kb_pt9_predAccuracy.rds 04-Aug-2021 17:02 74M
stdcv_AD_predAccuracy.rds 02-Aug-2021 13:11 74M
stdcv_DirDom_predAccuracy.rds 02-Aug-2021 13:12 74M
test_cvAD_markerEffects.rds 02-Aug-2021 13:15 4M
test_cvAD_meanPredAccuracy.rds 02-Aug-2021 13:15 811
test_cvAD_parentfolds.rds 02-Aug-2021 13:15 26K
test_cvAD_predAccuracy.rds 02-Aug-2021 13:13 1501
test_cvAD_predMeans.rds 02-Aug-2021 13:15 570
test_cvAD_predVars.rds 02-Aug-2021 13:12 615
test_cvAD_varPredAccuracy.rds 02-Aug-2021 13:13 978
top50crosses.csv 04-Aug-2021 17:01 11K
verified_ped.txt 02-Aug-2021 13:18 271K