PLINK v1.90b3.30 64-bit (27 Jan 2016) Options in effect: --bfile /home/jj332_cas/marnin/IITA_EA_2020/output/chr5_DCas20_5261_EA_REFimputedAndFiltered --keep-allele-order --out /home/jj332_cas/marnin/IITA_EA_2020/output/chr5_DCas20_5261_EA_REFimputedAndFiltered --recode A --recode-allele /home/jj332_cas/marnin/IITA_EA_2020/output/chr5_DCas20_5261_EA_REFimputedAndFiltered.alleleToCount Hostname: cbsurobbins.biohpc.cornell.edu Working directory: /home/jj332_cas/marnin/IITA_EA_2020 Start time: Wed Nov 11 21:09:48 2020 Random number seed: 1605146988 515677 MB RAM detected; reserving 257838 MB for main workspace. 2315 variants loaded from .bim file. 1835 people (0 males, 0 females, 1835 ambiguous) loaded from .fam. Ambiguous sex IDs written to /home/jj332_cas/marnin/IITA_EA_2020/output/chr5_DCas20_5261_EA_REFimputedAndFiltered.nosex . Using 1 thread (no multithreaded calculations invoked. Before main variant filters, 1835 founders and 0 nonfounders present. Calculating allele frequencies... done. 2315 variants and 1835 people pass filters and QC. Note: No phenotypes present. --recode A to /home/jj332_cas/marnin/IITA_EA_2020/output/chr5_DCas20_5261_EA_REFimputedAndFiltered.raw ... done. End time: Wed Nov 11 21:09:48 2020